ncbi / icn3d

web-based protein structure viewer and analysis tool interactively or in batch mode

https://www.ncbi.nlm.nih.gov/Structure/icn3d

ncbi/icn3d Issues

"load url" command broken in icn3d_3.29.5
Closed 5 months ago1
MTZ maps don't load properly /don't behave the same as other formats
Closed 5 months ago6
Cysteine disulfide bonds always visible
Closed 10 months ago5
Ideas for improving the cartoon
Closed 10 months ago6
Bonds between atoms are appearing as thick black tubes
Closed a year ago2
Mutation annotations
Closed a year ago6
URL not displaying desired annotation
Closed a year ago1
The 3D structure information for mutations doesn't always match the info in the 2D representation
Closed 2 years ago1
secondary structures are not being expressed in web page
Closed 2 years ago4
Inquiry drawing drawing a path from one residue to another residue
Closed 2 years ago9
Feature request: support mmcif via URL
Closed 2 years ago3
Legends do not appear for hydrophobicity if Wimley-White is chosen
Closed 2 years ago1
What do the colors mean for B factor?
Closed 2 years ago1
Color by Residue legend has uracil spelled wrong and is missing the X
Closed 2 years ago1
The hydrophocity legend should contain information about hydrophobicity
Closed 2 years ago1
Please fix the spelling in Legend for Color by Charge
Closed 2 years ago1
Legend - Coloring by Atom - show complete names
Closed 2 years ago2
Is there a command or function that can enable to display PAE map?
Closed 2 years ago2
Chemical display isn't right
Closed 2 years ago7
Unable to show selected chemicals when using Chrome
Closed 2 years ago3
Customize menus doesn't work as expected
Closed 2 years ago3
Open AlphaFold PAE file with latest result file
Closed 2 years ago2
Viewing predicted mutations in aligned structures
Closed 2 years ago3
Could we apply a "lock" to keep something hidden?
Closed 2 years ago1
selecting sugars and other chemicals
Closed 2 years ago2
Problem with viewing structures side by side
Closed 2 years ago2
React support
Closed 2 years ago15
Unable to select and highlight domain in aligned structures
Closed 2 years ago2
JS Widget missing images
Closed 2 years ago3
Unable to use command: jupyter labextension install jupyterlab_3dmol
Closed 3 years ago10
Feature request - export selected residues and a count as a text file
Closed 3 years ago3
The membrane information should be hidden by default
Closed 3 years ago7
Browser control / alt key issues
Updated 3 years ago2
Unable to remove membrane objects
Closed 3 years ago1
Unable to reset information in the 2D Diagram viewer
Closed 3 years ago2
Style changes aren't applied to selection
Updated 3 years ago6
The amino acid names in on the X axis of the 2D interaction map are too difficult to read
Closed 3 years ago4
The highlight for a chain name goes away when the second chain in an aligned pair is selected.
Updated 3 years ago1
The Alternate key doesn't always work
Closed 3 years ago2
Confusion with structure alignments
Closed 3 years ago6
Can't hide sidechains
Closed 3 years ago6
Working with alignments crashes or hangs Firefox
Updated 3 years ago5
Selecting and coloring one chains changes the color in all unselected chains too
Closed 3 years ago2
Select by Distance is not working with metals
Closed 3 years ago3
Can the atom element labels be the same size? See the image
Closed 3 years ago4
The Disulfide bond annotations are in the Sequences and Annotations section are incorrect. Some cysteines are not shown and residues without sulfur are annotated as containing disulfide bonds.
Closed 3 years ago3
Clicking "Toggle Highlight" causes my selected amino acids to jump out of the view
Closed 3 years ago3
Unable limit labels to selected residues
Closed 3 years ago2
Can we get rid of the dropshadow on annotations?
Updated 3 years ago1
Links from the chain names to the NCBI protein database seem to be broken
Closed 3 years ago4