Nandita R's starred repositories
snakemake-training
Increasingly complete example bioinformatics workflow
SARS-CoV-2-freebayes
Analysis of SARS-CoV-2 genome variants collected with freebayes variant caller
SARS-CoV-2-RBD_MAP_HAARVI_sera
Mutational antigenic profiling of SARS-CoV-2 RBD against human convalescent sera from the HAARVI cohort
vcfiterator
Python module for iterating over a VCF file, parsing and generating data structures.
Awesome-CV
:page_facing_up: Awesome CV is LaTeX template for your outstanding job application
SARS-CoV-2_GTG
Genomic Tech's COVID sequencing
ncov-tools
Small collection of tools for performing quality control on coronavirus sequencing data and genomes
bioinformatics-one-liners
Bioinformatics one liners from Ming Tang
Complete-Python-3-Bootcamp
Course Files for Complete Python 3 Bootcamp Course on Udemy
Pan-Coronavirus-Gene-Regulatory-Networks
We aim to identify consensus gene sets/modules that are consistently dysregulated during infection by various coronaviruses with the aim of enhancing the understanding of SARS-CoV-2 infection and how it causes COVID-19.
biopython-coronavirus
Biopython Jupyter Notebook tutorial to characterize a small genome
scDeepCluster
scDeepCluster for Single Cell RNA-seq data
RNA-seq-analysis
RNAseq analysis notes from Ming Tang