mxenoph

mdx-deck

♠️ React MDX-based presentation decks

code-surfer

Rad code slides <🏄/>

joomla-cms

Home of the Joomla! Content Management System

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

nextflow

A DSL for data-driven computational pipelines

CommonDataModel

Definition and DDLs for the OMOP Common Data Model (CDM)

posterdown

Use RMarkdown to generate PDF Conference Posters via HTML

MACS

MACS -- Model-based Analysis of ChIP-Seq

containers

Bioinformatics containers

climate-change-data

:earth_africa: A curated list of APIs, open data and ML/AI projects on climate change

plantuml-syntax

vim syntax file for plantuml

chip-seq-pipeline2

ENCODE ChIP-seq pipeline

ThemePark

Fun ggplot themes for popular culture

atac_dnase_pipelines

ATAC-seq and DNase-seq processing pipeline

simply-react

Screening_Protocols_manuscript

Scripts from the Joung et al Nature Protocols 2016 manuscript on knockout and transcriptional activation screening

map-collection-dist

react-joomla

Interacting Joomla with React

pomodoro-clock

A pomodoro clock for Pomodoro Technique Timer

ASAP

Amplicon Sequencing Analysis Pipeline

amplimap

amplicon/smMIP mapping and analysis pipeline

islet_CNN

Analysis in islet CNN manuscript

scGET

Molecular-Data-Science

FOS course Molecular Data Science

unpack

Vector unpack assignment syntax for R

metaseq-biotrac56

Materials for the metaseq presentation at NIH FAES Bio-Trac 56 (http://www.biotrac.com/pages/Tracs/Trac56.html)

AmpSeq

A framework for semi-automated analysis of Amplicon Sequencing data

regionReportSupp

Supplementary material for regionReport paper

increaser-timepicker

Time Picker with React