Matthijs Berends's repositories
plot2
A streamlined extension of 'ggplot2' designed to simplify and accelerate the creation of data visualisations. 'plot2' automates common tasks such as axis handling, plot type selection, and data transformation, allowing users to create complex, publication-ready plots with minimal code. It integrates seamlessly with the tidyverse.
pkgdown
Generate static html documentation for an R package
PhD_student_info
This is a simple repo with info for my (new) PhD students.
gallery
Gallery of ggplot2 extensions
mariana
A thTheme and RStudio theme from Sublime Text 3
Microsoft365R
R SDK for interacting with Microsoft 365 APIs
roxygen2
Generate R package documentation from inline R comments
OpenCore-Legacy-Patcher
Experience macOS just like before
microorganisms
An R package containing data sets with up to date microbial taxonomy
tinytest
A lightweight, no-dependency, but full-featured package for unit testing in R
hashing
Simple Shiny app to encrypt data for safe, anonymised data transfer
certe-medical-epidemiology
Source universe for: certe-medical-epidemiology
a_new_instrument_for_microbial_epidemiology
This is my full PhD thesis in R Markdown (using the bookdown package), containing a PDF and EPUB file, and a website in the ‘docs’ folder with the integral content of the book. The shortened URL is git.io/PhDthesisAMR.
AMR_data_analysis_with_R
Source code of the book: "Antimicrobial Resistance Data Analysis With R"
r-for-teaching
Portable version of R and RStudio, with the AMR package and most tidyverse packages pre-installed
caret
caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models
pillar
Format columns with colour
poorman
A copy of dplyr verbs using only base R