R scripts for the quality control for quantitative proteomics data.
Please read the manual for further instructions on how to use the code (also possible without prior knowledge of R).
You can download the code by clicking on the green "Code" button on the upper right, and choose "Download ZIP".
The script "QC_script_for_manuscript.R" contains the code for the following manuscript:
Rozanova, S.; Uszkoreit, J.; Schork, K.; Serschnitzki, B.; Eisenacher, M.; Tönges, L.; Barkovits-Boeddinghaus, K.; Marcus, K. Quality Control—A Stepchild in Quantitative Proteomics: A Case Study for the Human CSF Proteome. Biomolecules 2023, 13, 491. https://doi.org/10.3390/biom13030491