mparker2

seaborn_sinaplot

A python implementation of the sinaplot using matplotlib and seaborn

g4netx

simple G-Quadruplex polymorphism prediction using sequence based network analysis

matplotlib_logo

DNA/RNA/Protein Sequence Logos with matplotlib

regex_classifier

experimental sklearn classifer building regex ensembles using genetic algorithm...

veg_seasonality

fruit and vegetable seasonlity chart

airpol

classify_an_elephant

classifies an elephant with inception v3

cydtw

Cython funcs for Dynamic Time Warp

ea-utils

Automatically exported from code.google.com/p/ea-utils

hypotheticalbattlesbot

Twitter bot which makes made up creatures fight

iCLIPlib

Tools for dealing with iCLIP data

krugernationalpark

lesbirel_et_al_methylation_export

mparker2.github.io

personal website built with minimal mistakes jekyll theme

mparker_phd_thesis

PhD Thesis

nanopolish

Signal-level algorithms for MinION data

NanopolishComp

NanopolishComp is a Python3 package for downstream analyses of Nanopolish output files

nonogram_qr

Create Nonograms encoding QR codes encoding secrets...

pandoc-shortcaption

Adds pandoc filter for short LaTeX captions.

pomegranate

Fast, flexible and easy to use probabilistic modelling in Python.

prophet

Tool for producing high quality forecasts for time series data that has multiple seasonality with linear or non-linear growth.

pychopper

A tool to identify, orient, trim and rescue full length cDNA reads

qdre

kill sge jobs with regular expressions and other parameters

SUPPA

SUPPA2: Fast quantification of differential splicing

syri

Synteny and Rearrangement Identifier

tombo

Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.

UMI-tools

Tools for handling Unique Molecular Identifiers in NGS data sets

UpSetPlot

Draw UpSet plots with Pandas and Matplotlib

wotstomata

xpore

Detection of differential RNA modifications from direct RNA sequencing