Ryan D. Morin Laboratory

Ryan D. Morin Laboratory's repositories

Galaxy Tool Shed repositories maintained and developed by the Morin Lab.

Language:PythonGPL-3.03 6 11

Clips, Aligns, and Accurately Removes Duplicates on Customer Barcode Adapter Paired End Fastqs

Language:PythonNOASSERTION2 11 2

Error suppression and variant calling pipeline for libraries prepared using barcoded adapters (Formerly ProDuSe)

Language:PythonNOASSERTION1 3 1

Kronos pipelines maintained by the Morin lab

Language:Shell1 8 4

A collection of Galaxy tools and workflows for performing cancer genome analyses.

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Python functions for cancer genomics

Language:PythonGPL-3.0000

Kronos components maintained by the Morin lab

Language:Python08 1

Battenberg R package for subclonal copynumber estimation

Language:RAGPL-3.0020

A collection of curated guidelines to enable reproducibility in computational biology

Read and somatic variant simulator for targetted Illumina sequencing data

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LoFreq Star: Sensitive variant calling from sequencing data

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:cancer: Summarize, Analyze and Visualize MAF files from TCGA or in house studies.

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Collection of R functions by the Morin lab

GPL-3.0030

PTI: a top-down approach to track tumor evolution

NOASSERTION000

See README.

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