Joshua Klein's repositories
ms_deisotope
A library for deisotoping and charge state deconvolution of complex mass spectra
ms_peak_picker
A small library to provide peak picking for software processing mass spectrometry data
glycresoft
An LC-MS/MS glycan and glycopeptide search engine
glycopeptidepy
A library for describing the structure of glycopeptides
thermorawfilereader.rs
Reading Thermo RAW files from Rust
pynumpress
A thin, more convenient wrapper around MSNumpress
chemical_elements
Rust Chemical Composition Library
force_directed_layout
A terrible facsimile of the force-directed layout algorithms in d3.js
glycresoft_app
Web Application and Task Server for GlycReSoft
glycresoft_desktop
Electron-based Desktop Application for GlycReSoft
mass-fragment-index
A Rust implementation of an in-memory mass search index
proteome_exchange
A Python client for Proteome Exchange
SpectralLibraryFormat
Spectral Library Format: A standard format to exchange/distribute spectral libraries/archives
ThermoRawFileParser
Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono