Joshua Klein's repositories
ms_deisotope
A library for deisotoping and charge state deconvolution of complex mass spectra
ms_peak_picker
A small library to provide peak picking for software processing mass spectrometry data
glycresoft
An LC-MS/MS glycan and glycopeptide search engine
glycopeptidepy
A library for describing the structure of glycopeptides
thermorawfilereader.rs
Reading Thermo RAW files from Rust
pynumpress
A thin, more convenient wrapper around MSNumpress
chemical_elements
Rust Chemical Composition Library
glycresoft_app
Web Application and Task Server for GlycReSoft
glycresoft_desktop
Electron-based Desktop Application for GlycReSoft
mass-fragment-index
A Rust implementation of an in-memory mass search index
quantms
Quantitative mass spectrometry workflow.
quantms.io
The proteomics quantification format, extending mzTab for large scale datasets.
SpectralLibraryFormat
Spectral Library Format: A standard format to exchange/distribute spectral libraries/archives
svg
Composer and parser for SVG