Mike Lin (mlin)

mlin

Geek Repo

Location:Honolulu, HI, USA

Home Page:https://www.mlin.net

Twitter:@DNAmlin

Github PK Tool:Github PK Tool


Organizations
ga4gh
openwdl
samtools
single-cell-data
vgteam

Mike Lin's starred repositories

jupyterlab-desktop

JupyterLab desktop application, based on Electron.

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static-wiki

Wikipedia using only static assets & no backend

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bitcandle

Store data on Bitcoin for 350 sats/KB up to 185 KB by using P2SH-P2WSH witness scripts

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gh-openapi-docs

Package for building OpenAPI schema docs and UI for gh-pages

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sqlean

The ultimate set of SQLite extensions

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awscurl

curl-like access to AWS resources with AWS Signature Version 4 request signing.

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code-server

VS Code in the browser

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rust-htslib

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

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asciicast2gif

Generate GIF animations from asciicasts (asciinema recordings)

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amazon-ebs-autoscale

Don't run out of disk space on your EC2 instance when generating or working with large files. Automatically add EBS volumes to a filesystem mount point in response to disk utilization.

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ffscreencast

ffscreencast - ffmpeg screencast/desktop-recording with video overlay and multi monitor support

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dxCompiler

WDL and CWL compiler for the DNAnexus platform

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litestream

Streaming replication for SQLite.

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project-error-handling

Error handling project group

License:Apache-2.0Stargazers:267Issues:0Issues:0

ipget

Retrieve files over IPFS and save them locally.

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Bandage

a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

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Winnowmap

Long read / genome alignment software

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wdl

Workflow Description Language - Specification and Implementations

License:BSD-3-ClauseStargazers:755Issues:0Issues:0

py-demandimport

Lazy import python modules for low start-up time. (Taken from mercurial.)

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pygit2

Python bindings for libgit2

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bitcoin-verify

A high level python library for verifying bitcoin signatures within bitcoin signatures etc.

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sourmash

Quickly search, compare, and analyze genomic and metagenomic data sets.

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GFA-spec

Graphical Fragment Assembly (GFA) Format Specification

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rust-web3

Ethereum JSON-RPC multi-transport client. Rust implementation of web3 library. ENS address: rust-web3.eth

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Chainy

Proof of Existence + Links + Files + Blockchain.

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hpp_production_workflows

WDL’s and Dockerfiles for assembly QC process

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rs-gfa

GFA parser in Rust

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gor

GORpipe is a tool based on a genomic ordered relational architecture and allows analysis of large sets of genomic and phenotypic tabular data using declarative query language, in a parallel execution engine.

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massgate

Massgate is the online backend server for the Massive Entertainment game World in Conflict, and is now open-source to make it possible for anyone to host their own Massgate server.

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