mlin - Giters

Mike Lin's starred repositories

code-server

VS Code in the browser

Language:TypeScriptMIT67270 725 3493

litestream

Streaming replication for SQLite.

Language:GoApache-2.010560 88 271

sqlean

The ultimate set of SQLite extensions

Language:CMIT3633 49 102

jupyterlab-desktop

JupyterLab desktop application, based on Electron.

Language:TypeScriptBSD-3-Clause3607 52 430

ffscreencast

ffscreencast - ffmpeg screencast/desktop-recording with video overlay and multi monitor support

Language:ShellMIT1773 36 32

pygit2

Python bindings for libgit2

Language:PythonNOASSERTION1602 70 654

rust-web3

Ethereum JSON-RPC multi-transport client. Rust implementation of web3 library. ENS address: rust-web3.eth

Language:RustMIT1447 29 303

asciicast2gif

Generate GIF animations from asciicasts (asciinema recordings)

Language:CSSMIT1204 14 80

massgate

Massgate is the online backend server for the Massive Entertainment game World in Conflict, and is now open-source to make it possible for anyone to host their own Massgate server.

Language:C++GPL-2.01127 860

wdl

Workflow Description Language - Specification and Implementations

BSD-3-Clause761 89 297

awscurl

curl-like access to AWS resources with AWS Signature Version 4 request signing.

Language:PythonMIT746 9 81

Bandage

a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

Language:C++GPL-3.0578 37 109

static-wiki

Wikipedia using only static assets & no backend

Language:JavaScriptMIT576 10 4

sourmash

Quickly search, compare, and analyze genomic and metagenomic data sets.

Language:PythonNOASSERTION463 19 1671

ipget

Retrieve files over IPFS and save them locally.

Language:ShellMIT382 26 64

rust-htslib

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

Language:RustMIT297 29 156

project-error-handling

Error handling project group

Apache-2.0267 74 30

Winnowmap

Long read / genome alignment software

Language:CNOASSERTION242 15 45

GFA-spec

Graphical Fragment Assembly (GFA) Format Specification

Language:Makefile191 33 72

amazon-ebs-autoscale

Don't run out of disk space on your EC2 instance when generating or working with large files. Automatically add EBS volumes to a filesystem mount point in response to disk utilization.

Language:ShellMIT111 11 34

Chainy

Proof of Existence + Links + Files + Blockchain.

Language:JavaScriptApache-2.077 21 3

hpp_production_workflows

WDL’s and Dockerfiles for assembly QC process

Language:Jupyter NotebookMIT58 5 11

py-demandimport

Lazy import python modules for low start-up time. (Taken from mercurial.)

Language:PythonGPL-2.044 4 8

GORpipe is a tool based on a genomic ordered relational architecture and allows analysis of large sets of genomic and phenotypic tabular data using declarative query language, in a parallel execution engine.

Language:JavaAGPL-3.039 9 13