michael-ford

michael-ford's repositories

data-science-development-project-template

A logical, reasonably standardized, but flexible project structure for doing and sharing data science research work while developing a software tool.

Language:Jupyter NotebookMIT400

ImmunoTyper

IGHV genotyper tool using PacBio WGS Long Reads

Language:Python300

bakir

Biologically-informed Killer cell immunoglobulin-like receptor (KIR) gene annotation tool 🧬

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ImmunoTyper-SR

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datasharing

The Leek group guide to data sharing

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dbsystems

CMPT 843: Traditional vs. Modern Database Systems (SFU, Spring 2017)

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deep-learning-models

Keras code and weights files for popular deep learning models.

Language:PythonMIT000

desolation-dws.github.io

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neoantigen-toolkit

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bakir-paper-methods

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gemini

a lightweight db framework for exploring genetic variation.

Language:PythonMIT010

giab_data_indexes

This repository contains data indexes from NIST's Genome in a Bottle project.

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git-cheat-sheet

:octocat: git and git flow cheat sheet

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git-subrepo

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jupyter-snippets

Cache of my Jupyter-lab snippets (https://github.com/QuantStack/jupyterlab-snippets)

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michael-ford.github.io

Build a beautiful and simple website in literally minutes. Demo at http://deanattali.com/beautiful-jekyll

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new-experiment-template

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skirt

The pipeline of KIR allele annotations for human genome assemblies

Language:PythonGPL-3.0000

wtfpython

A collection of interesting, subtle, and tricky Python snippets.

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