matt-sd-watson / spora

:mushroom: spora: Streamlined Phylogenomic Outbreak Report Analysis

Home Page:https://matt-sd-watson.github.io/spora/

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--rename and --names-csv conflict in the output report for SNP distance

matt-sd-watson opened this issue · comments

Use of --rename and --names-csv in the output report causes an error in the detection of the focal and background names for SNP distance.

Closed via #23