marksgraham / OCT-Converter

Tools for extracting the raw optical coherence tomography (OCT) and fundus data from proprietary file formats.

https://pypi.org/project/oct-converter/

marksgraham/OCT-Converter Issues

Optovue .OCT to dicom conversion
Closed 4 days ago1
Saving .FDA files
Closed 4 days ago1
Scan quality e2e format
Updated 19 days ago2
bscan data match volume's data
Updated 3 months ago1
Saving data as E2E
Updated 4 months ago1
Feedback on Dicom files
Updated 4 months ago23
Exporting Contours (segmentation data) from E2E files
Closed 4 months ago2
Hi, is there any way to find scaleX in metadata
Updated 5 months ago8
Roadmap and development ideas
Updated 6 months ago14
Problem about read edb, sdb, and pdb files
Closed 6 months ago2
NameError: name 'laterality' is not defined
Closed 6 months ago5
e2e file reading quantity problem
Closed 8 months ago12
No module named 'oct_converter.readers.zeissdcm'
Closed 2 years ago6
error when importing function create_dicom_from_oct
Closed 8 months ago2
convert to nii.gz after extraction
Closed 8 months ago5
Bioptigen error loading several frames per scan
Closed 8 months ago1
Stream Error when reading E2E file
Closed a year ago16
reading e2e laterality metadata
Updated 10 months ago3
Reading e2e metadata
Updated 10 months ago29
Reading E2E, UnicodeDecode error
Closed a year ago10
Zeiss Dicom issue
Closed a year ago1
Reading E2E, memory error
Closed a year ago
.fda error
Closed a year ago2
Resaving E2E files
Closed a year ago1
'ascii' codec can't decode byte 0xff in position 8: ordinal not in range(128)
Closed a year ago5
typo
Closed a year ago1
DCM extraction?
Closed a year ago3
Blueish fundus image from fda files
Closed a year ago2
.opt Files
Closed a year ago7
Parse segmentation from fda files
Closed a year ago1
Commit Request
Closed a year ago2
Commit For FDA Files
Closed a year ago2
Unable to decode the data
Closed a year ago2
Cannot read Zeiss Dicom OCTA scans
Closed a year ago4
decode error when opening a .oct image: UnicodeDecodeError: 'utf-8' codec can't decode byte 0xe4 in position 66: invalid continuation byte
Closed a year ago9
oct_volume.peek() doesnt work with numpy 1.24
Closed a year ago3
fda example bug
Closed 2 years ago5
How to get OCTA from fda file
Closed 2 years ago1
Get layer positions from bscan metadata
Closed 2 years ago8
Image upload
Closed 2 years ago
Error with E2E file extraction
Closed 2 years ago4
StreamError when converting .oct files
Closed 2 years ago2
Acquisition Date for .e2e files
Closed 2 years ago7
Errors about converting .oct to .img
Closed 2 years ago2
pdb, sdb, edb file format to image
Closed 2 years ago2
The width and height of the image file are different
Closed 2 years ago4
Error while extracting OCT images from E2E format
Closed 2 years ago7
fda.read_oct_volume gives No decoders are available error
Closed 2 years ago7
".fromstring" method in e2e.py generates warnings with possible downstream consequences
Closed 2 years ago4
laterality is not properly extracted from e2e files
Closed 2 years ago