lin-lab / MetaSKAT

MetaSKAT is a R package for multiple marker meta-analysis across studies.

MetaSKAT

MetaSKAT is a R package for multiple marker meta-analysis. It can carry out meta-analysis of SKAT, SKAT-O and burden tests with individual level genotype data or gene level summary statistics.

User Group

Please join the SKAT/MetaSKAT Google Group to ask / discuss / comment about SKAT/MetaSKAT.

Download

We uploaded the package to CRAN. You can download the package, manual, and vignettes here.

References

• Seunggeun Lee, Tanya M. Teslovich, Michael Boehnke, Xihong Lin, General Framework for Meta-analysis of Rare Variants in Sequencing Association Studies, In The American Journal of Human Genetics, Volume 93, Issue 1, 2013, Pages 42-53, ISSN 0002-9297, doi:10.1016/j.ajhg.2013.05.010.