lianos

Steve Lianoglou's repositories

multiGSEA

NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept here for posterity.

Language:RMIT20 4 27

sparrow

Take command of your set enrichment analyses.

Language:RMIT20 3 11

papers-bin

Run commands against your Papers2 database from the command line

Language:Python16 3 3

seqtools

Utilities to deal with sequencing data

Language:Python9 4 2

buckshot

An R interface to "shotgun", a parallel lasso and sparse logistic regression solver written in C++

Language:C++8 5 2

fastx-toolkit

C Library to work with fasta/q files

Language:Shell6 20

shikken

A more R-idiomatic wrapper to the shogun toolbox.

Language:R5 30

biosignals

Smooth, find peaks and edges in 1D signal vectors.

Language:R3 2 6

multiGSEA.shiny

Provides shiny components to visualize multilGSEA results

Language:RNOASSERTION3 5 8

Rx

Eases some of the pain when using Sublime Text 2 to code in R

Language:Python3 4 3

ARE.utils

A conglomeration of utilities that aren't project specific and use in my R day-to-day

Language:R2 30

BiocSeqSVM

Pedagogical machine learning exercises for NGS data

Language:R2 20

moin-mule

Utility that enables sending file attachments to MoinMoin wikis from the command line

Language:Python2 3 3

GenomicCache

Extensions to Bioconductor GenomicFeatures package. Primarily, this implements a more "Gene Centric" view on the world, as opposed to base GenomicFeature's transcript/exon/cds centric view.

Language:R1 2 7