kyclark

tiny_python_projects

Code for Tiny Python Projects (Manning, 2020, ISBN 1617297518). Learning Python through test-driven development of games and puzzles.

command-line-rust

Code for Command-Line Rust (O'Reilly, 2022, ISBN 9781098109417) https://learning.oreilly.com/library/view/command-line-rust/9781098109424/

biofx_python

Code for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)

new.py

Python program to write new Python programs

make-tutorial

Tutorial on using Makefiles

cutr

Rust version of `cut` that respects delimiters

commr

Rust version of `comm`

csvchk

Rust version of csvchk

csvchk-py

Check one record of a delimited text file

rust-atomics

advent2021

Advent of Code 2021

be434-fall-2021

BE434/535 Fall 2021

brian-clr

Git repo for training

dotfiles

vimrc

dxapp-editor

Elm-based editor for dxapp.json

dxapp_json_elm

Elm editor for dxapp.json

dxCompiler

WDL and CWL compiler for the DNAnexus platform

dxrs

Rust implementation of DNAnexus dx toolkit

elm-json-editor

Elm JSON editor

fang-headr

Command-Line Rust page 82

krust

counts k-mers, written in rust

kseq-rs

A FASTA/FASTQ format parser library

kyclark.blog

kyclark.github.io

lis

nail

Nail is an Alignment Inference tooL

PiPressuredisplay

python-radix-sort

Python radix sort

SRSLYumi

Process unique molecule identifiers (UMI) for SRSLY DNA NGS libraries

tiny_elm_projects

Tiny Elm Projects