Katherine Silliman's starred repositories
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Successful Job Applications and Grants
MitoFinder
MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data
NGS-PrimerPlex
NGS-PrimerPlex is a high-throughput tool for mupltiplex primer design
Anacapa
Written by Emily Curd (eecurd@g.ucla.edu), Jesse Gomer (jessegomer@gmail.com), Gaurav Kandlikar (gkandlikar@ucla.edu), Zack Gold (zjgold@ucla.edu), Max Ogden (max@maxogden.com), Lenore Pipes (lpipes@berkeley.edu)and Baochen Shi (biosbc@gmail.com). Assistance was provided by Rachel Meyer (rsmeyer@ucla.edu).
Reproducible-science-in-R
This site provides information on conducting reproducible science using the R language.
project_juvenile_geoduck_OA
This repository provides data and scripts to analyze the influence of ocean acidification on juvenile geoduck DNA methylation and phenotype.
ASH_Putnam_Lab_Notebook
Open Lab Notebook
find_sex_loci
Find sex specific loci from genome-wide genetic markers.