Michał Krassowski's repositories
easy-entrez
Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.
multi-omics-state-of-the-field
Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"
jupyterlab-dagitty
JupyterLab renderer of dagitty causal diagrams
computational-notebooks-for-biomedical-research
NGSeminar on the use of Jupyter and R notebooks in biomedical research
rpy2-complex-heatmap-grammar
Python heatmap interface using intuitive grammar of graphics, implemented as an rpy2 wrapper around ComplexHeatmap package.
jupyter-locuszoom
LocusZoom in Jupyter notebooks
jupyterlab-voice-control
Voice control over JupyterLab and Jupyter notebooks
jupyterlab_spellchecker
Spellchecker for jupyterlab notebook markdown cells.
pyinstrument
🚴 Call stack profiler for Python. Shows you why your code is slow!
benchmarks
Benchmarking tools for JupyterLab
ggbeeswarm
Column scatter / beeswarm-style plots in ggplot2
ggraph
Grammar of Graph Graphics
jupyter-book
Create beautiful, publication-quality books and documents from computational content.
jupyter-renderers
Renderers and renderer extensions for JupyterLab
jupyterlab-demo
Demonstrations of JupyterLab
jupyterlab-desktop
A desktop application for JupyterLab, based on Electron.
jupyterlab-limit-output
Limit long text output for a single JupyterLab mime render.
jupyterlab-sidecar
A sidecar output widget for JupyterLab
jupyterlab_code_formatter
A JupyterLab plugin to facilitate invocation of code formatters.
jupyterlab_execute_time-feedstock
A conda-smithy repository for jupyterlab_execute_time.
python-lsp-server
Fork of the python-language-server project, maintained by the Spyder IDE team and the community
rpy2-arrow
Share Apache Arrow datasets between Python and R.
team-compass
A repository for team discussion, syncing, and meeting notes.