Vishal Koparde, PhD's repositories
clipperhelper
Scripts to create custom references to be used with clipper
GATK_SNP_pipeline
Call variants(SNPs) using GATK
Superparanoid
Automated inparanoid/multiparanoid
AWS_MVP_HPC
Kevin's Fork
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CCBR-GitHub-Playground
This training repo is for CCBR internal devs to familiarize with GitHub operation
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Dockers
A collection of Dockerfiles to facilitate reproducibility across computing environments.
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MiSeq_assembly_pipeline
Assemble reads from MiSeq (or HiSeq)
plumber_testing
Developing Test API with Plumber
pyfaidx
Efficient pythonic random access to fasta subsequences
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python_api_testing
Scripts to demo API calling via Python
regexcite
What the Package Does (One Line, Title Case)
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SICER2
Trying to fix the GenomeData.py issue
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TALON
Technology agnostic long read analysis pipeline for transcriptomes
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