knausb / proc_mpileup

Process a directory of gzipped samtools mpileup files, take coverage count, standard deviation, and nonzero counts for each and write to one table

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proc_mpileup

Process a directory of gzipped samtools mpileup files, take coverage count, standard deviation, and nonzero counts for each and write to three tables (one for each summary).

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Process a directory of gzipped samtools mpileup files, take coverage count, standard deviation, and nonzero counts for each and write to one table

License:GNU General Public License v3.0


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Language:Python 91.3%Language:Shell 8.7%