Jintao He (kingtom2016)

kingtom2016

Geek Repo

Company:Zhejiang University

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Bio-utopia

Jintao He's starred repositories

Langchain-Chatchat

Langchain-Chatchat(原Langchain-ChatGLM)基于 Langchain 与 ChatGLM, Qwen 与 Llama 等语言模型的 RAG 与 Agent 应用 | Langchain-Chatchat (formerly langchain-ChatGLM), local knowledge based LLM (like ChatGLM, Qwen and Llama) RAG and Agent app with langchain

Language:TypeScriptLicense:Apache-2.0Stargazers:32006Issues:285Issues:3895

GPT_API_free

Free ChatGPT API Key,免费ChatGPT API,支持GPT4 API(免费),ChatGPT国内可用免费转发API,直连无需代理。可以搭配ChatBox等软件/插件使用,极大降低接口使用成本。国内即可无限制畅快聊天。

Language:PythonLicense:MITStargazers:24417Issues:118Issues:293

mactype

Better font rendering for Windows.

Language:C++License:GPL-3.0Stargazers:10082Issues:216Issues:1014

Tai

👻 在Windows上统计软件使用时长和网站浏览时长

Awesome-AI

Awesome AI,你的《人工智能指南》!

fastp

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

Language:C++License:MITStargazers:1926Issues:50Issues:522

northpole

存储北极学派的哲学,思考,教义repository

Language:HTMLLicense:NOASSERTIONStargazers:492Issues:16Issues:11

MathlibExplorer

Visualizing the network of math theories.

MetaPhlAn

MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data

Language:PythonLicense:MITStargazers:302Issues:20Issues:205

ZJU-Connect-for-Windows

基于 Qt 编写的 ZJU 网络客户端

Language:C++License:LGPL-3.0Stargazers:287Issues:1Issues:3

DRAM

Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes

Language:PythonLicense:GPL-3.0Stargazers:254Issues:6Issues:338

VirSorter2

customizable pipeline to identify viral sequences from (meta)genomic data

Language:PythonLicense:GPL-2.0Stargazers:221Issues:4Issues:214

GToTree

A user-friendly workflow for phylogenomics

Language:ShellLicense:GPL-3.0Stargazers:203Issues:11Issues:97

metaeuk

MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics

Language:CLicense:GPL-3.0Stargazers:178Issues:9Issues:90

skani

Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.

Language:RustLicense:MITStargazers:169Issues:5Issues:29
Language:PythonLicense:MITStargazers:90Issues:2Issues:57

MuDoGeR

MuDoGeR makes the recovery of genomes from prokaryotes, viruses, and eukaryotes from metagenomes easy.

Language:ShellLicense:GPL-3.0Stargazers:87Issues:4Issues:18

doFuture

:rocket: R package: doFuture - Use Foreach to Parallelize via Future Framework

defense-finder

Systematic search of all known anti-phage systems.

Language:PythonLicense:GPL-3.0Stargazers:76Issues:1Issues:53

FlashWeave.jl

Inference of microbial interaction networks from large-scale heterogeneous abundance data

Language:JuliaLicense:NOASSERTIONStargazers:74Issues:7Issues:39

ReporterScore

Generalized Reporter Score-based Functional Enrichment Method for Omics Data

nonpareil

Estimate metagenomic coverage and sequence diversity

Language:C++License:NOASSERTIONStargazers:46Issues:5Issues:68

PhaBOX

Local version of the virus identification and analysis web server (tool set)

Language:PythonLicense:AFL-3.0Stargazers:36Issues:3Issues:23

mobileOG-db

code repo for mobileOG-db

Language:PythonLicense:GPL-3.0Stargazers:32Issues:2Issues:15

defense-finder-models

MacSyFinder models allowing for a systematic search of anti-phage systems

Language:PythonLicense:GPL-3.0Stargazers:18Issues:2Issues:31

Living-Oceans

🌊 Robust workflows for gathering data about your local ocean.

Language:Jupyter NotebookStargazers:13Issues:4Issues:0
Language:NextflowLicense:MITStargazers:10Issues:3Issues:8

G4iMGrinder

G4-iM Grinder is a fast, robust and highly adaptable algorithm. It is capable of locating, identifying, qualifying and quantifying DNA and RNA potential quadruplex structures, such as G-quadruplex, i-Motifs and their higher order versions.

Language:RLicense:GPL-3.0Stargazers:7Issues:1Issues:7
Language:PythonLicense:GPL-3.0Stargazers:4Issues:1Issues:8