kieranrcampbell / ouija

Descriptive probabilistic marker gene approach to single-cell pseudotime inference

http://kieranrcampbell.github.io/ouija

kieranrcampbell/ouija Issues

Ouija with precomputed pseudotime
Updated 4 years ago
Can't load sce data
Updated 5 years ago30
Pseudo time as function of a predefined group of genes
Updated 5 years ago3
Inference without modeling dropout?
Updated 5 years ago2
error: "Unknown or uninitialised column: 'Gene'."
Closed 6 years ago3
Neverending sampling chain 1, cycling CPU
Updated 6 years ago1
Update documentation
Closed 7 years ago1
Find switch-like genes on existing pseudotime
Closed 7 years ago1
Error in svd when response_type="transient"
Updated 7 years ago3
Unclear licensing terms
Updated 8 years ago3
Ouija not working w/ SCESet object
Updated 8 years ago1
Intelligent initialisations
Updated 8 years ago