Kids First Data Resource Center's repositories
kf-ui-fhir-data-dashboard
💡📊 Prototype FHIR data dashboard - what's in my FHIR server?
kf-utils-python
🛠 Collection of reusable Python utilities related to the Kids First project
kf-annotation
Variant caller annotation repository. Outputs from variant germline and somatic callers need annotation to add context to calls. Currently WIP
kf-portal-etl-task-service
:white_check_mark: A template for a microservice written in Java and a resource server under Ego with JWT authorization
kf-arranger
🔎 Elasticsearch API Server for Kids First Portal
kf-cavatica-python-tools
Kids First Tools built on top of Sevenbridges Python API
kf-cloud-credits
Documentation for the Kids First Cloud Credit Pilot
kf-task-snapshot
:stars: Snapshot Task application running against Release Coordinator
kf-pedigree-builder
:family: Build pedigree files from Kids First Data
arranger
🚧 Data Portal Generation
datahub
Forked from MSKCC, this is used to push KF published studies to MSKCC's cBioPortal to increase visibility and collaboration in pediatric reserarch
kf-api-search-members
This service provides an endpoint to query the member elasticsearch database. Results are returned based on a provided query string and some low / high limit for the number of results desired.
kf-bixu-template
This is a repo template that closely adheres to the general organizational template with a few modifications to for the BIXU team
kf-cavatica-public-app-publisher
This repo houses scripts and guidelines on publishing a CWL app as a public app on Cavtica
kf-dataservice-tools
🧮 tools for interacting with the dataservice
kf-drp-auth-ui
:bar_chart: UI for Authentication and Authorization services
kf-etl-indexer
Code taking data from s3 to elasticsearch
kf-ingest-package-demo
Demo Test Ingest Package
kf-task-release-reports
📈 Generate data reports per release
kf-update-dbgap-consent
🛠 dbGaP sample consent status processor for the Kids First project
kf-users-api
API to manage users
kf-zeppelin
Customization of Apache Zeppelin for KF
kf-zeppelin-web
Contain theme for zeppelin UI customization
ngs_checkmate_wf
A cwl workflow to run ngs_checkmate on large datasets
persona
:construction: User profile and identify management
riff
:construction: A Microservice for URL Shortening and sharing.