Beast code in Giters

Kevin Yamauchi's starred repositories

napari: a fast, interactive, multi-dimensional image viewer for python

Language:PythonBSD-3-Clause2171 46 2999

3D U-Net model for volumetric semantic segmentation written in pytorch

Language:Jupyter NotebookMIT1965 360

📝 A nicely formatted LaTeX preprint template

Language:TeXMIT548 9 29

New Arduino interrupt library, designed for Arduino Uno/Mega 2560/Leonardo/Due

Language:C++330 36 57

Differentiable Finite Element Method with JAX

Language:PythonGPL-3.0240 11 30

An open and interoperable data framework for spatial omics data

Language:PythonBSD-3-Clause218 10 366

Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python

Language:PythonNOASSERTION201 10 261

Python observer pattern (callback/event system). Modeled after Qt Signals & Slots (but independent of Qt)

Language:PythonBSD-3-Clause79 6 38

napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool

Language:PythonBSD-3-Clause47 6 28

Create movies from series of key-frames in napari.

Language:PythonBSD-3-Clause37 4 5

A 3D interactivity toolbox for napari

Language:PythonBSD-3-Clause32 4 96

Pipeline for putting surface meshes into correspondence

Language:PythonBSD-3-Clause23 3 4

Language:PythonBSD-3-Clause19 1 13

Language:HTML13 1 1

Napari plugin to add compatibility to tissuumaps

Language:PythonMIT4 1 2