kblin

supybot-gsoc

A collection of patches used to pimp gsocbot, the supybot of #gsoc

fancy-prompt

An /etc/profile.d settings file creating a fancy prompt.

contorted

Automatically exported from code.google.com/p/contorted

genomedb-py

A tool to manage and use some metadata around NCBI GenBank genome files

rpi-temp-monitor

1-wire temperature monitoring for the Raspberry Pi

statusbot

A command-line to twitter tool I use to let my servers tweet their status.

abyss

:microscope: De novo genome sequence assembler to assemble large genomes using short reads

c_fast5

C code to extract data from fast5 files

checkhost

Simple python-based host checker with Twitter notifcations

cleanup-files

A simple periodic file cleanup tool written in Go.

cwl-antismash

First try wrapping antiSMASH in a Common Workflow Language description

diamond

Accelerated BLAST compatible local sequence aligner.

docker

Docker - the open-source application container engine

gc_split

Split sequences based on their GC content

github-paper

Plos in Computational Biology paper related with github for researchers, code, source and document

GSoC

OBF Google Summer of Code

jsTree-directive

pelican-bootstrap3

Bootstrap 3 theme for Pelican

phycolo

Pyholgenetic Codon-based Localization of Gene Clusters

plunger

Automatically exported from code.google.com/p/plunger

r-novice-analysis-viz

redmine_latex_mathjax

A plugin to enable mathjax on redmine

reproducible-research-talk

A talk on reproducible research.

rpi-cluster

Configuration for my RPi2 Cluster

rpi-ctdb-ansible

Ansible config for my RaspberryPi2 CTDB cluster setup

sgrna-extract

Extract the variable part of sgRNAs from a longer sequence

shell-novice

Software Carpentry introduction to the shell for novices.

temp-alert

Read data from the rpi-temp-monitor website and send warning emails if some sensors report problems

training-prep-2015-09

Instructor training preparation, September 2015

weather-go