kassambara

ggpubr

'ggplot2' Based Publication Ready Plots

survminer

Survival Analysis and Visualization

rstatix

Pipe-friendly Framework for Basic Statistical Tests in R

factoextra

Extract and Visualize the Results of Multivariate Data Analyses

wordpress-docker-compose

Deploy Wordpress on Localhost using Docker Compose

ggcorrplot

Visualization of a correlation matrix using ggplot2

nginx-multiple-https-websites-on-one-server

Host Multiple HTTPS Websites on One Server

fastqcr

fastqcr: Quality Control of Sequencing Data

datarium

Data Bank for Statistical Analysis and Visualization

Deep-learning-books

Books for machine learning, deep learning, math, NLP, CV, RL, etc

stepprofiler

ConsensusTME

ConsensusTME Gene Sets and R Script

ggplot2

An implementation of the Grammar of Graphics in R

MOMA

MOMA

pubr

QuickReviewer

Allows for multiple people to quickly review images and provide categorical feedback

git-filter-repo

Quickly rewrite git repository history (filter-branch replacement)

HE2RNA_code

Train a model to predict gene expression from histology slides.

heatmaply

Interactive Heat Maps for R Using plotly

im4MEC

Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometrial cancer from haematoxylin and eosin-stained whole-slide images: a combined analysis of the PORTEC randomised trials and clinical cohorts'.

lintr

Static Code Analysis for R

Patch-GCN

Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021

PORPOISE

Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell

python-wsi-preprocessing

Python Whole Slide Image Preprocessing

r-dockerbox

SPIAT

Spatial Image Analysis of Tissues

styler

Non-invasive pretty printing of R code

uyar_et_al_multiomics_deeplearning

maui goes pancancer

wdl

Workflow Description Language - Specification and Implementations

wsi_mil