Jakob Voigts (jvoigts)

jvoigts

Geek Repo

Company:HHMI janelia

Home Page:http://www.voigtslab.org

Twitter:@Jvoigts

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Organizations
moorelab
open-ephys

Jakob Voigts's starred repositories

lime

Open source API-compatible alternative to the text editor Sublime Text

TensorFlow-Tutorials

TensorFlow Tutorials with YouTube Videos

Language:Jupyter NotebookLicense:MITStargazers:9279Issues:543Issues:110

Spacegray

A Hyperminimal UI Theme for Sublime Text

Language:JavaScriptLicense:MITStargazers:7188Issues:131Issues:165

JUCE

JUCE is an open-source cross-platform C++ application framework for desktop and mobile applications, including VST, VST3, AU, AUv3, LV2 and AAX audio plug-ins.

Language:C++License:NOASSERTIONStargazers:6631Issues:256Issues:795

rsync-time-backup

Time Machine style backup with rsync.

quietnet

Simple chat program that communicates using inaudible sounds

Language:Jupyter NotebookLicense:MITStargazers:2935Issues:120Issues:34

life

Life - a timeline of important events in my life

CaImAn

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

Language:PythonLicense:GPL-2.0Stargazers:637Issues:47Issues:772

npy-matlab

Experimental code to read/write NumPy .NPY files in MATLAB

Language:Jupyter NotebookLicense:BSD-2-ClauseStargazers:532Issues:20Issues:14

Neural_Decoding

A python package that includes many methods for decoding neural activity

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:429Issues:24Issues:14
Language:PythonLicense:MITStargazers:258Issues:8Issues:13

CaImAn-MATLAB

Complete Matlab pipeline for large scale calcium imaging data analysis

Language:MATLABLicense:GPL-2.0Stargazers:252Issues:58Issues:68
Language:PythonLicense:NOASSERTIONStargazers:209Issues:11Issues:36

cellfinder

Automated 3D cell detection in very large images

Language:PythonLicense:BSD-3-ClauseStargazers:181Issues:15Issues:234

DeepInsight

A general framework for interpreting wide-band neural activity

Language:Jupyter NotebookLicense:MITStargazers:156Issues:14Issues:8

Suite2P

Tools for processing 2P recordings

Language:MATLABLicense:NOASSERTIONStargazers:122Issues:38Issues:171

LastBlackBox

A course for brains interested in brains (not tools interested in tools)

Language:PythonLicense:NOASSERTIONStargazers:50Issues:5Issues:1

Oat

Real-time position tracker for behavioral research

Language:C++License:GPL-3.0Stargazers:49Issues:11Issues:24

CURBD

Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)

Language:MATLABLicense:GPL-3.0Stargazers:49Issues:6Issues:2

plot2svg

Save MATLAB plots as svg files

Language:MATLABLicense:BSD-2-ClauseStargazers:47Issues:7Issues:11

ONIX

ONI-compatible hardware, firmware, and host APIs for advanced neuroscience experiments.

Language:HTMLLicense:NOASSERTIONStargazers:30Issues:9Issues:8

shuttle-drive

Next generation tetrode drive implant

jonnew-lbr

jonnew's personal CAD library

PythonPlugin

A plugin for open-ephys enabling the insertion of Cython into the open-ephys signal chain.

kwiklib

LEGACY - This project is only used in KlustaViewa

Language:PythonLicense:NOASSERTIONStargazers:10Issues:11Issues:10

MSR

Calculates the multiscale relevance of neurons

Language:PythonLicense:MITStargazers:7Issues:0Issues:0

twister3

A simple and fast microwire twister

rhythm

Intan Technologies Rhythm Verilog HDL code

open-instruments-core

Core open instruments API

Language:C++Stargazers:2Issues:3Issues:0

emergenceLPs

Analysis of large potentials in intracranial recordings

Language:MatlabLicense:GPL-3.0Stargazers:1Issues:0Issues:0