GenePlast
Geneplast1 is designed for evolutionary and plasticity analysis based on orthologous groups distribution in a given species tree. It implements the Bridge algorithm to determine the evolutionary root of a given gene based on its orthologs distribution.
Read more about it here
Footnotes
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Dalmolin, JS R, Castro, AA M (2015). Geneplast: evolutionary rooting and plasticity inference. R package.
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