Jacques Serizay (js2264)

js2264

Geek Repo

Location:Paris, FR

Home Page:js2264.github.io

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tidyomics

Jacques Serizay's starred repositories

awesome-machine-learning

A curated list of awesome Machine Learning frameworks, libraries and software.

Language:PythonLicense:NOASSERTIONStargazers:64700Issues:3328Issues:88

awesome-network-analysis

A curated list of awesome network analysis resources.

rsync-time-backup

Time Machine style backup with rsync.

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

tidyverse

Easily install and load packages from the tidyverse

Language:RLicense:NOASSERTIONStargazers:1624Issues:93Issues:252

r-color-palettes

Comprehensive list of color palettes available in R ❤️🧡💛💚💙💜

awesome-shiny-extensions

🐝 Awesome R and Python packages offering extended UI or server components for the web framework Shiny

ComplexHeatmap

Make Complex Heatmaps

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scRNA.seq.course

Analysis of single cell RNA-seq data course

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ggalt

:earth_americas: Extra Coordinate Systems, Geoms, Statistical Transformations & Scales for 'ggplot2'

Language:RLicense:NOASSERTIONStargazers:654Issues:29Issues:64

scRNAseq-analysis-notes

scRNAseq analysis notes from Ming Tang

License:MITStargazers:616Issues:46Issues:0

scRNA-seq_notes

A list of scRNA-seq analysis tools

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awesome-nextflow

A curated list of nextflow based pipelines

HiC_tools

A collection of tools for Hi-C data analysis

shinydashboardPlus

extensions for shinydashboard

Language:RLicense:NOASSERTIONStargazers:452Issues:19Issues:155

meghna-hugo

Meghna Hugo is a responsive, minimalist, lightweight, and fast loading one-page business theme built with HTML5/CSS3, Hugo, JavaScript, and JQuery.

Language:HTMLLicense:MITStargazers:437Issues:10Issues:108

hic-data-analysis-bootcamp

Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.

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awesome-r-pkgtools

A curated list of awesome tools for R package development

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HiC_data

A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.

color-filters-reconstruction

Very accurate color filters reconstruction tools based on 3D color LUTs

Language:PythonLicense:MITStargazers:153Issues:9Issues:5

clisymbols

Unicode symbols for CLI applications, with fallbacks

Language:RLicense:NOASSERTIONStargazers:79Issues:4Issues:7

rworkflows

Continuous integration for R packages. 🔀 Automates testing ✅, documentation website building 📦, & containerised deployment 🐳.

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shinyCV

create beautiful CV with shiny and adminLTE2

bcl2fastq

NextSeq specific bcl2fastq2 wrapper.

Language:PythonLicense:MITStargazers:53Issues:6Issues:12

mully

R package to create, modify and visualize graphs with multiple layers.

omega-hugo

Omega is a landing page business theme powered by Hugo.

Language:SCSSLicense:MITStargazers:42Issues:4Issues:2

nullranges

Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRanges), or set of control ranges that are matched across one or more covariates (matchRanges).

Language:RLicense:GPL-3.0Stargazers:26Issues:6Issues:14

metaTOR

Metagenomic binning based on Hi-C data

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BiocActions

Develop and host GitHub actions for Bioconductor

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r-learning-resources-for-genomics

A curated collection of free resources to help the aspiring computational biologist learn about the R programming language.

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