johnny990628

maftools

Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

HistoSSLscaling

Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., MedRxiv (2023). We publicly release Phikon 🚀

quilt1m

[NeurIPS 2023 Oral] Quilt-1M: One Million Image-Text Pairs for Histopathology.

DGMIL

Official PyTorch implementation of our MICCAI 2022 paper: DGMIL: Distribution Guided Multiple Instance Learning for Whole Slide Image Classification.

tcga_segmentation

Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024

dsmil-wsi

DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image

deep_survival_analysis

Survival analysis with deep learning

tf_keras_gradcamplusplus

tensorflow.keras implementation of gradcam and gradcam++

DenseNet-MURA-PyTorch

Implementation of DenseNet model on Standford's MURA dataset using PyTorch

ItS2CLR

Multiple Instance Learning via Iterative Self-Paced Supervised Contrastive Learning (CVPR 2023)

tmi2022

A graph-transformer for whole slide image classification

Hell2024

BCL

A bayesian collaborative learning framework for whole-slide image classification

RetCCL

MuRCL

MuRCL: Multi-instance Reinforcement Contrastive Learning for Whole Slide Image Classification

AdvMIL

[MedIA 2024] The implementation of AdvMIL: Adversarial Multiple Instance Learning for the Survival Analysis on Whole-Slide Images

CVPR2024-Papers-with-Code-Demo

收集 CVPR 最新的成果，包括论文、代码和demo视频等，欢迎大家推荐！Collect the latest CVPR (Conference on Computer Vision and Pattern Recognition) results, including papers, code, and demo videos, etc., and welcome recommendations from everyone!

hvit

Hierarchical Vision Transformers for Multi-Scale Prostate Cancer Grading in Whole Slide Images

hs2p

Histopathology Slides Preprocessing Pipeline

full-blockchain-solidity-course-py

Ultimate Solidity, Blockchain, and Smart Contract - Beginner to Expert Full Course | Python Edition

DevToysMac

DevToys For mac

DevToys

A Swiss Army knife for developers.

leetcode-solution

Explore diverse LeetCode solutions in Python, C++, JavaScript, SQL, and TypeScript. Ideal for interview prep, learning, and code practice in multiple programming languages.

Pipeline-Processing-TCGA-Slides-for-MIL

This repo provides an exhaustive pipeline of processing TCGA whole-slide images for downstream multiple instance learning.

dino

PyTorch code for Vision Transformers training with the Self-Supervised learning method DINO

mae

PyTorch implementation of MAE https//arxiv.org/abs/2111.06377

DTFD-MIL

PathoMCH

qupath

QuPath - Bioimage analysis & digital pathology

cellpose

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities