Joe Flack's repositories
BOE_tabulator
Reads PDFs from Baltimore's archive of minutes from the Board of Estimates and places the data in a searchable table.
argparse-to-web
Convert a Python Argparse CLI tool to a Flask / Bootstrap web app.
BMI-Calculator
Building a BMI Calculator
calibro
The tool for automated black box parameter calibration and ensemble forecasting.
ccdh-terminology-service
CCDH Terminology and Mapping Service
ccdhmodel
CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)
covid_campus_model
A Model of COVID-19 Transmission and Control on University Campuses
cpptesting
Various instances of personal tinkering to explore the nuances of the C++ language.
fastapi-cache
fastapi-cache is a tool to cache fastapi response and function result, with backends support redis and memcached.
jupyter_notebooks
Jupyter notebooks.
linkml-model-template
Enhanced template for building and publishing LinkML based models
linkml-runtime
Runtime support for linkml generated models
linkml-test-template
Just testing out LinkML templating.
omim-data-pipeline
Tools for fetching and processing data from https://omim.org/.
schematic
Package for biomedical data model and data ingress management
snet-cli
SingularityNET CLI for interacting with SNET blockchain contracts and deployed services.
sssom-py
Python toolkit for SSSOM mapping format
TbEpiAndCostAnalysis-Data
Data for "US-based TB Epi and Cost Analysis Web App". Placeholder; handling of data storage and versioning TBD.
TbEpiAndCostAnalysis-WebUI
Web front-end for "US-based TB Epi and Cost Analysis Web App". Placeholder; back and front ends may be mono repo, TBD.
template-configurator
Configuration utility for generating linkml models in the linkml-model-template
thesaurus-obo-edition
OBO Library edition of NCIt
waiting-room-app
An primarily android tablet application which will be used by patients in waiting rooms. After a short survey, they will receive educational content. Written in Cordova and React.