Joe Flack's starred repositories
Open-Assistant
OpenAssistant is a chat-based assistant that understands tasks, can interact with third-party systems, and retrieve information dynamically to do so.
human-phenotype-ontology
Ontology for the description of human clinical features
sparql.anything
SPARQL Anything is a system for Semantic Web re-engineering that allows users to ... query anything with SPARQL.
ontology-access-kit
Ontology Access Kit: A python library and command line application for working with ontologies
curate-gpt
LLM-driven curation assist tool (pre-alpha)
schemasheets
Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats
schema-automator
Automated assistance for the schema development lifecycle
DrugMapping
Tool for mapping drugs in a source vocabulary to RxNorm(Extension) concepts in the OMOP-CDM
sphintoxetry-cookiecutter
A Cookiecutter template for BBOP work
BLE-Beetle-Pixels
Code for an animated Neopixel belt, run by a DFRobot BLE Beetle controller
fhirstarters
A collection of example projects to get you up to speed with HL7 FHIR
fhir-ig-build-template
A FHIR implementation guide build and publish template