jni

skan

Python module to analyse skeleton (thin object) images

affinder

Quickly find the affine matrix mapping one image to another using manual correspondence points annotation

zarpaint

Paint segmentations directly to on-disk/remote zarr arrays

mysquishy

Recompress zarr chunks in-place

napari

Napari PyQt5 and VisPy based GUI plugin

scikit-image

Image Processing SciKit (Toolbox for SciPy)

useful-histories

My repository for particularly useful analyses carried out in IPython (not the notebook)

1password-teams-open-source

Get a free 1Password Teams membership for your open source project

conda-build

Commands and tools for building conda packages

conda-zsh-completion

zsh completion for conda

config

A master repository for all my configuration files

dask

Parallel computing with task scheduling

defdap

A python library for correlating EBSD and HRDIC data

n5-utils

simple standalone BigDataViewer for multiple N5 (or HDF5) datasets

napari-animation

A napari plugin for making animations

napari-console-feedstock

A conda-smithy repository for napari-console.

napari-defdap

Simple wrapper around DefDAP functionality

napari-docs

Documentation for napari (other than API docs)

napari-multiscale-rendering-prototype

napari-ome-zarr

A napari plugin for zarr backed OME-NGFF images

new-napari-logo

Experimenting with a code-generated logo for napari

npe2

ome-types

native Python dataclasses for the OME data model

ome-zarr-py

Experimental implementation of images in Zarr files.

ont

Random collection of useful functions (to me) that haven't (yet) found a better home

rplidar

Python module for RPLidar A1 and A2 rangefinder scanners

sampleproject

A sample project that exists for PyPUG's "Tutorial on Packaging and Distributing Projects"

scientific-python-archive

Archive for public materials such as meeting minutes, logos, and presentations

tokyo-night-vscode-theme

A clean, dark Visual Studio Code theme that celebrates the lights of Downtown Tokyo at night.

zarr-python

An implementation of chunked, compressed, N-dimensional arrays for Python.