jmuhlich

odes

git repo of the odes scikit for scipy

rasmodel

alquraishi_sh2_networks

Interactive webpage for the paper "A multiscale statistical mechanical framework integrates biophysical and genomic data to assemble cancer networks" by AlQuraishi et al.

pytivoclient

Python command line tool and library for listing and retrieving recordings on a TiVo.

wp_sitemap

Construct HTML sitemap from WordPress pages via XML-RPC API in Python

datarail-2.0

DataRail 2.0

darpa-bigmech-cure

hgvs

HGVS -- Tools to Parse, Format, and Map Biological Sequence Variants

movie_mosaic

Builds an HTML gallery for an array of static images and associated movie clips.

sampattavanich_2013

single cell dynamics web project (DEPRECATED -- merged into hmslincs)

cosmic_exploration

Tools to load COSMIC data files into Postgres and explore them

niepel_2013

breast cancer signaling web project (DEPRECATED -- merged into hmslincs)

image_explorer

Tools for evaluating image quality

mangifera

django-conferenceabstract

lincs-drug-targets

bayessb

bionetgen

BioNetGen is software for the specification and simulation of rule-based models of biochemical systems

earm

EARM V2.0 FILES

ImageRail

grumble

A node.js chat server/client application.

grumblechat

Grumble Chat: Free web based chat for Google Appengine

orchestra_lsf_lesson

Materials for a short lesson on using Orchestra and LSF

SDCube_API

API used to create and manage HDF5-based SDCubes

perlin

A node.js perlin noise generator library.

pysundials

Python bindings for the SUNDIALS suite of differential equation solvers

pkn_helpers

Prior Knowledge Network helper scripts

lsftools

Python code for working with Platform LSF

matlab_dct_orchestra

Matlab Distributed Computing Toolbox workalike for the HMS Orchestra cluster

MediaWiki-Bot

A MediaWiki bot framework written in Perl. This is just a lazy SVN->git dump.