jefferyUstc

awesome-chatgpt-prompts

This repo includes ChatGPT prompt curation to use ChatGPT better.

ChatGPT-Next-Web

A cross-platform ChatGPT/Gemini UI (Web / PWA / Linux / Win / MacOS). 一键拥有你自己的跨平台 ChatGPT/Gemini 应用。

TaskMatrix

openai-python

The official Python library for the OpenAI API

ChatPaper

Use ChatGPT to summarize the arXiv papers. 全流程加速科研，利用chatgpt进行论文全文总结+专业翻译+润色+审稿+审稿回复

wechatpy

WeChat SDK for Python

mysupervisor_save

收集“导师评价”相关资源，及原“导师评价网”存档数据

python-ternary

:small_red_triangle: Ternary plotting library for python with matplotlib

ChatGPT-on-WeChat

🤖️ Deploy ChatGPT on your WeChat within 2 steps! 两步在云端部署你的微信ChatGPT聊天机器人！🤖️

BCDU-Net

BCDU-Net : Medical Image Segmentation

single-cell-best-practices

https://www.sc-best-practices.org

mixcr

MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

PyComplexHeatmap

PyComplexHeatmap: A Python package to plot complex heatmap (clustermap)

napari-chatgpt

A napari plugin to process and analyse images with chatGPT!

data_science_resources

📊 Data Science Resources, Data Science Standards & Machine Learning Pipelines

spateo-release

Spatiotemporal modeling of spatial transcriptomics

MOODS

MOODS: Motif Occurrence Detection Suite

rapids_singlecell

Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.

sopa

Technology-invariant pipeline for spatial omics analysis (Xenium / MERSCOPE / CosMx / PhenoCycler / MACSima / Hyperion) that scales to millions of cells

Monopogen

SNV calling from single cell sequencing

scimap

Spatial Single-Cell Analysis Toolkit

mzkit

Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.

mistyR

Multiview Intercellular SpaTial modeling framework

Single-Cell-Metabolic-Landscape

Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data

SpatialDM

Spatial direct messaging detected by bivariate Moran

imzMLConverter

Tool for converting mass spectrometry data to the imzML format.

spatial

Single-Cell Spatial Explorer

imaging-mass-spectrometry

Research and Overview

pIMZ

This framework allows to perform scRNA-seq-like analyses of imaging mass-spectrometry data. Check out the example jupyter-notebook in examples/

mass2adduct

Analysis of matrix-metabolite adducts in MALDI mass spectrometry imaging datasets