A jupyter notebook to look at coronavirus species and SARS-CoV2 spike proteins.
Designed to be run on Google Colab.
- Visit Colab (https://colab.research.google.com) and log in.
- Import notebook via GitHub (https://github.com/jasonwong-lab/HKU_STEM)
The notebook includes the following steps:
- Set working directory
- Package installation and downloads for workshop
- Whole genome alignment of coronaviruses
- Spike protein sequence analysis