jarodroland

nobrainer

A framework for developing neural network models for 3D image processing.

neurodocker

Generate custom Docker and Singularity images, and minimize existing containers

reg-fusion

Python implementation of Wu et al (2018)'s registration fusion

wolt-python-package-cookiecutter

Cookiecutter for rapidly creating modern & high-quality Python packages

ColeAnticevicNetPartition

Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)

cbig_network_correspondence

tpm

Tmux Plugin Manager

terminaltexteffects

TerminalTextEffects (TTE) is a terminal visual effects engine, application, and Python library.

nvtop

GPU & Accelerator process monitoring for AMD, Apple, Huawei, Intel, NVIDIA and Qualcomm

smug

Session manager and task runner for tmux. Start your development environment within one command.

eza

A modern alternative to ls

zoxide

A smarter cd command. Supports all major shells.

fzf

:cherry_blossom: A command-line fuzzy finder

ripgrep

ripgrep recursively searches directories for a regex pattern while respecting your gitignore

fd

A simple, fast and user-friendly alternative to 'find'

DL-DiReCT

DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation

miniforge

A conda-forge distribution.

brainmorph

A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration

CC_QC_CNN

Implementation of a CNN for quality control of corpus callosum segmentation

voxeloc

pNet

A toolbox for personalized functional network modeling

ComBatHarmonization

Harmonization of multi-site imaging data with ComBat

ABCD_Harmonizer

Interactive tool to remove scanner induced variance in image features from the Adolescent Brain Cognitive Development Study

nda-tools

Python package for interacting with NDA web services. Used to validate, submit, and download data to and from NDA.

ultralytics

NEW - YOLOv8 🚀 in PyTorch > ONNX > OpenVINO > CoreML > TFLite

objWriter

saves Wavefront .obj files from Matlab

QC

Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data

Modern-CPP-Programming

Modern C++ Programming Course (C++03/11/14/17/20/23/26)

SynCT_TcMRgFUS

Official PyTorch Implementation of "Synthetic CT Skull Generation for Transcranial MR Imaging–Guided Focused Ultrasound Interventions with Conditional Adversarial Networks"

inshellisense

IDE style command line auto complete