Jacobo de la Cuesta's repositories
Applied_R4eBio
Notebooks and material for R applications course
bsp
Code for reproducing the results of the paper "Body size phenotypes comprehensively assess cardiometabolic risk and refine the association between obesity and gut microbiota" (de la Cuesta-Zuluaga et al. 2017, International Journal of Obesity, doi: 10.1038/ijo.2017.281)
data-science-learning-resources
A collection of machine learning resources that I've found helpful (I only post what I've read!)
Dieciseis
Maier Lab 16S rRNA workflow
metagMisc
Miscellaneous functions for metagenomic analysis.
msc-data-skills
Materials for MSc Data Skills course
rbook
Source files for "Learning Statistics with R"
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
Struo
Ley Lab MetaGenome Profiler DataBase generator
svm-r-markdown-templates
I have a suite of R Markdown templates for academic manuscripts, beamer presentations, and syllabi. I share them here.
tests-as-linear
Common statistical tests are linear models (or: how to teach stats)
thomas-adventuRe
Thomas' adventuRe