InSysBio CY

LikelihoodProfiler.jl

LikelihoodProfiler is a Julia package for practical identifiability analysis and confidence intervals evaluation.

SbmlViewer

The collection of transformations from SBML files into human readable formats

covid19-qsp-model

Open Source QSP model describing SARS-CoV-2 virus and host cell life cycles, immune response and therapeutic treatments

likelihoodprofiler-cases

Storing test and experimental cases for LikelihoodProfiler.jl

LikelihoodProfiler.py

mathsjs-cmathml

Translation from mathjs object to content MathML

mathjs-mathml

It extends mathjs library by function translating the mathjs' expressions to MathML string

mathjs-translate

Utilites for manipulation of mathjs expressions.

pretty-xml-textconv

Transforming xml to pretty form in command prompt for git diff.

sbio-to-json

Code for transformation of Matlab/Simbiology model to JSON format

5db

Documentation for fIVE DB

alco

A simple model of alcohol PK build on published data

drug-loaded-nanoparticles

PBPK Modeling For Therapeutic Nanoparticles Loaded With Drug

faah-inhibitor

[reproduced] QSP modeling platform describing Fatty Acid Amide Hydrolase inhibition in human

a50

ant-mito-model

Adenine Nucleotide Translocase model

confest

covid-19-data

Provide a simple and unified interface to COVID-19 latest datasets

dbs-package

Accessory R functions to support DBSolveOptimum

heta-case-mini

Demo example of QSP platfrom developed with Heta and qs3p-js

insulin-signaling-t2d

Notebooks usage case: Insulin Signaling in Type 2 Diabetes

platform-template

slv-utils

Utilities for working with SLV and DAT files.

topo-sort

Simple and fast implementation of topological sorting. No dependencies. A circular graph will throw an error with circular nodes info.

units-parser

Parsing and transformation of units of measurements

vp-erythropoiesis