Ino de Bruijn's repositories
2014-5-metagenomics-workshop
Metagenomics Workshop 2014-5-21 to 2014-5-23 at SciLifeLab, Stockholm
snakemake-parallel-bwa
A Snakefile to parallelize bwa.
gnu-make-job-scheduler
A library for GNU make to schedule rules as jobs with qsub or sbatch
metassemble
Scripts to run several metagenomics assembly programs
snakemake-uppmax-demo
Demonstrates the use of snakemake compared to GNU make on Uppmax with a simple example
2013-metagenomics-workshop-gbg
Metagenomic Workshop Göteborg
2014-06-favorite-microbe
Presentation Flavobacterium psychrophilum
2014-06-lims-developers-workshop
ETT LIMS developers workshop
2014-08-work-seminar
Overview of previous work
2014-09-haspeborg-moose-project
Clustering metagenomic assemblies with CONCOCT for moose project
2014-11-masmvali-presentation
Presentation at metagenomics hackathon NI Cambridge
2014-3-lims-presentation
Presentation of LIMS for Ettema Lab
assembly-workshop
Assembly workshop at SciLifeLab
bioinfo-outreach
Presentations, posters and workshop site for my homepage
bsc-thesis
BSc thesis - CollaMusica - Music composition in a distributed collaborative environment
CONCOCT-test-data
A test dataset for CONCOCT
django-import-export
Django application and library for importing and exporting data with admin integration.
envgen.github.io
The Environmental Genomics Home Page
masmvali-publication
MASMVALI Publication
masmvaliweb
Web service for MASMVALI (Metagenomic Assembly VALIdation)