idworkin

ZOL851

R tutorials associated with the class ZOL851 at Michigan State University

TurnerKernForaging

grant_proposal

Some Useful files I have generated while figuring out how to write proposals

McMasterDataLunch

Just a place to put links to papers and libraries that we discuss in DataLunch

read-cleaning-format-conversion

Short scripts to convert or modify Bioinformatics files

2015-angus-paper

ATM_SociabilityGenomicsOutputs

This is a temporary copy of the output tables from ATM analysis from the sociability strains

bds-files

Supplementary files for my book, "Bioinformatics Data Skills"

ChandlerChariPLoSGenetics2017

covariance-reaction-norms

Code, tutorial, and data files for estimating covariance reaction norm (CRN) models

cricket-wings

Scripts and data for the analyses from Pitchers et al. 2014 "The potential influence of morphology on the evolutionary divergence of an acoustic signal."

drosophila_phylogeny

Pipeline overview and code (including BLT-DCT program) for widespread introgression across a phylogeny of 155 Drosophila genomes

ethograms

This is for projects in progress

getting-started-with-genomics-tools-and-resources

Unix, R and python tools for genomics and data science

knitr

A general-purpose tool for dynamic report generation in R

labs

Rmd source files for the HarvardX series PH525x

ml-examples

Machine Learning examples, mostly in R

MPCMArchive

Archive of Online Practical Materials for the book of Modern Phylogenetic Comparative Methods (ed. Garamszegi, 2014)

MR-PMM

Tutorial materials covering model specification, diagnostics, validation, inference and simulation for multi-response phylogenetic mixed models in R.

oneliners

Useful bash one-liners for bioinformatics.

r_scripts

Scripts I generate for R for my thesis

RadishEvolution

Just a placeholder for some markdown documents

regexcite

This Does Little

SeminarSeriesMcMaster

Just information for the seminar series at McMaster for Biology

swirl

Statistics with Interactive R Learning

teaching_myself_stan

Just getting used to stan, and how it works.

testanick.github.io

Build a beautiful and simple website in literally minutes. Demo at http://deanattali.com/beautiful-jekyll

Tools4RR

Materials for a one-credit course on reproducible research

Wilson2021_Evolution_Data

Data and scripts associated with Wilson, Siddiqui and Dworkin 2021 (Evolution)

Wing_Biometrics