2022_multiomic_GC
Introduction
This repository is a part of the supplementary document of Park et. al., "Multi-omics Reveals Microbiome, Host Gene Expression, and Immune Landscape in Gastric Carcinogenesis" published in iScience 2022.
Setup
After cloning this github url into your local, run install_req_R_modules.R to install R libraries necessary to run the main script successfully.
Rscript ./install_req_R_modules.R
Reproducible pipeline
Rscript ./code_2022-02-07.R
Reference
"Multi-omics Reveals Microbiome, Host Gene Expression, and Immune Landscape in Gastric Carcinogenesis", Chan Hyuk Park, Changjin Hong, A-reum Lee, Jaeyun Sung, and Tae Hyun Hwang, iScience 2022