hochshi's repositories
apbs
Software for biomolecular electrostatics and solvation calculations
AttnPacker
Code and Pre-Trained Models for "AttnPacker: An end-to-end deep learning method for protein side-chain packing"
Choc-Spaced-Corne
Various choc spaced corne boards including a pg1232 version and a no diode bluetooth only version for nice!nanos or similar.
CoherentPointDrift
Single-Header Reference Implementation of Rigid Coherent Point Drift in C++ / Eigen3 in < 80 LOC
cpd
C++ implementation of the Coherent Point Drift point set registration algorithm.
CVPR21_FastSinkhornFilters
Sample code for Fast Sinkhorn Filters - from CVPR 2021
fgt
C++ library for fast Gauss transforms.
geomloss
Geometric loss functions between point clouds, images and volumes
hochshi.github.io
A beautiful, simple, clean, and responsive Jekyll theme for academics
kbd
for building keyboard libraries
keyboard-layout-analysis-tool
Analyze and compare various alternative keyboard layouts
litl
Litl is an easy to build 40% keyboard using only through hole components.
miryoku_kmonad
Miryoku is an ergonomic, minimal, orthogonal, and universal keyboard layout. Miryoku KMonad is the Miryoku implementation for KMonad.
miryoku_qmk
Miryoku is an ergonomic, minimal, orthogonal, and universal keyboard layout. Miryoku QMK is the Miryoku implementation for QMK.
muMatch
Pipeline for putting surface meshes into correspondence
OutRun
OutRun is an open-source, privacy oriented, outdoor fitness tracker.
parasail
Pairwise Sequence Alignment Library
pdb2pqr
PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.
propkatraj
pKa estimates for proteins using an ensemble approach
ProteinMPNN
Code for the ProteinMPNN paper
pycpd
Pure Numpy Implementation of the Coherent Point Drift Algorithm
pyfgt
A pybind11 wrapper for fgt a C++ library for fast Gauss transforms.
pynanoflann
Unofficial python wrapper to the nanoflann k-d tree
qmk_firmware
Open-source keyboard firmware for Atmel AVR and Arm USB families
rosetta
The Rosetta Bio-macromolecule modeling package.
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
synbiochem-py-feedstock
A conda-smithy repository for synbiochem-py.