bash script to quickly produce some assembly stats
sh N50.sh your_assembly_as_multifasta
Gives you:
-Number of contigs/scaffolds
-Total assembly size
-Largest contig/scaffold
-N50
-N90
bash script to quickly produce some assembly stats
bash script to quickly produce some assembly stats
sh N50.sh your_assembly_as_multifasta
Gives you:
-Number of contigs/scaffolds
-Total assembly size
-Largest contig/scaffold
-N50
-N90
bash script to quickly produce some assembly stats
MIT License