Giters
gymrek-lab
/
LongTR
Tandem repeat genotyping with long reads
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Stargazers:
19
Watchers:
3
Issues:
16
Forks:
0
gymrek-lab/LongTR Issues
Feature request: Support remote cram files
Closed
24 days ago
Comments count
4
Question about output and usage
Updated
a month ago
Comments count
2
No repeat were detected
Closed
a month ago
Comments count
5
VCF incorrectly specifies phased genotypes
Closed
a month ago
Comments count
3
TR region BED file - are start coordinates 1-based or 0-based?
Closed
3 months ago
Comments count
2
Test data
Closed
2 months ago
Comments count
6
Issue Cloning LongTR Repository: Permission Denied
Closed
3 months ago
Comments count
2
Variant position in the output VCF differs from locus coordinates in the input repeat region bed file
Closed
3 months ago
Comments count
2
"Aborting genotyping of the locus as the sequence upstream/downstream of the repeat is too repetitive for accurate genotyping"
Closed
3 months ago
Comments count
2
Low base quality score for ONTs data
Closed
4 months ago
Comments count
3
Low base quality score
Closed
5 months ago
Comments count
2
Compiling gives fatal errors
Closed
6 months ago
Comments count
5