gillislab

gillislab

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gillislab's repositories

MetaNeighbor

A method to rapidly assess cell type identity using both functional and random gene sets

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MetaMarkers

Efficiently compute robust markers across single-cell datasets

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pyMN

Python Implementation of MetaNeighbor scRNAseq Analysis Method

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barseq_analysis

Pipeline to analyze BARseq data

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background

What we talk about when we talk about ...

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EGAD

Gene network analysis

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Primate-MTG-coexpression

Conserved coexpression at single cell resolution across primate brains

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publications

Gillis lab annotated bibliography

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scqc

Meta-QC analysis of single cell RNAseq datasets

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Coexpressalog_Method_Development

For building up and validating the Coexpressalog Method

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mn_biccn_workshop

Notebook illustrating basic MetaNeighbor pipeline with BICCN data.

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