GIFT-Surg's repositories
fetal_brain_seg
A toolkit for fetal brain localization and segmentation using deep learning
FetalBrainParcellation
A tool for the automatic segmentation of fetal brain 3D T2-weighted MRI
GiftCloudServerBuilder
GIFT-Cloud's customised fork of xnatbuilder, used to set up a GIFT-Cloud server
GiftCloudUploader
A Java Web Start application for anonymising and uploading DICOM data to a GIFT-Cloud or XNAT server
VolumetricReconstructionFromPrintedFilms
A research-focused toolkit developed within the GIFT-Surg project to reconstruct a volumetric representation from printed brain MR films.
ITK_NiftyMIC
This repository contains numerous additional filters and functions to extend the standard (Wrap)ITK Release 4.13. It is a necessary requirement in order to use NiftyMIC and related toolkits.
NiftyMatch
A library featuring GPU implementations of feature detection and matching algorithms.
SPOT-A-NeonatalRabbit
Segmentation Propagation on Target (...as a Neonatal Rabbit)
FetalBrainSegmentation_MONAI
Tool for fetal brain segmentation in MRI
lie_exponential
Numerical computation of the Lie exponential for stationary velocity fields.
MRImultiAtlasForNeonatalRabbitBrain
Code for the benchmarking and validation of the Neonatal Rabbit brain Multi-Atlas
vessel-tools
Scripts and utility programs for extracting and processing vasculature
GiftCloudServerModule
GIFT-Cloud's customised server module, used to customise a GIFT-Cloud server
RabbitBrainAnalysis
Full pipeline for processing, segmentation and data analysis of a rabbit brain scan. See also https://www.sciencedirect.com/science/article/pii/S1053811918305366?via%3Dihub