GallVp

Liftoff

An accurate GFF3/GTF lift over pipeline

BRAKER

BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes

detect-nf-test-changes

Identify changes in Nextflow repo for CI testing

plotsr

Tool to plot synteny and structural rearrangements between genomes

syri

Synteny and Rearrangement Identifier

apptainer

Apptainer: Application containers for Linux

seqkit

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

nf-test

Simple test framework for Nextflow pipelines

free-disk-space

:octocat:⚙️🗑️ A GitHub Action to free disk space on an Ubuntu runner.

fetchngs

Pipeline to fetch metadata and raw FastQ files from public databases

drawio-desktop

Official electron build of draw.io

sequenceserver

Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)

nextflow

A DSL for data-driven computational pipelines

amazon-omics-tutorials

assemblyqc

A NextFlow pipeline for evaluating assembly quality

MPFlutterChart

MPAndroidChart Flutter version

rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

ecg-removal

Algorithms and evaluation toolkit for removing strong cardiac interference from surface EMG measurements

fasta_validator

C code to validate a fasta file

KParser

Kotlin Multiplatform Arithmatic Parser

LASwift

Linear Algebra library for Swift language

jabref

Graphical Java application for managing BibTeX and biblatex (.bib) databases

EMG-preprocessing-tools

Functions to denoise High Density EMG signals

flutter_realtime_chart_example

A flutter sample project using the line_chart of the mp_chart package to display a scrolling realtime chart - like an oscilloscope.

episode-code-samples

💾 Point-Free episode code.

Charts

Beautiful charts for iOS/tvOS/OSX! The Apple side of the crossplatform MPAndroidChart.

jdsp

A Java Library for Digital Signal Processing

jmathstudio

Java toolkit for image and signal processing

SwiftKotlin

A tool to convert Swift code to Kotlin.

EmbeddedLapack

Linear algebra for embedded system with MATLAB style