gabe-foley-thesis

gabe-foley-thesis

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gabe-foley-thesis's repositories

PO_Viterbi

Example code for running Partial Order Viterbi alignment method

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ancestral_agreement

Calculate the level of agreement between two ancestral reconstructions from differing tools

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ancestralcost

Calculate the parsimony cost of having an ancestral residue implied by an alignment and tree

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gabe-foley-thesis

Config files for my GitHub profile.

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Phylo_Island

Tool for performing phylogenetic and ancestral studies on multi-subunit proteins

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SeqScrub

Website for cleaning FASTA headers and checking for obsolete sequences.

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