Forrest Chen's repositories

rareGWAMA

TESLA implementation (part of rareGWAMA)

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simpleMR

R package for Mendelian Randomization

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Py_rvtest

python version for RVTests

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bookdown-demo

A minimal book example using bookdown

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cheatsheets-ai

Essential Cheat Sheets for deep learning and machine learning researchers

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courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

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cv

My CV built using RMarkdown and the pagedown package.

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Data_Sets_Problem_Solutions

My solutions to problems from ROSALIND, Books, and courses I have taken. Also some data sets are included.

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deeplearning-biology

A list of deep learning implementations in biology

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funfunchen.github.io

Use this template if you need a quick developer / data science portfolio! Based on a Minimal Jekyll theme for GitHub Pages.

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GWAS_summary_clean

data clean work

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handson-ml

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.

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handson-ml2

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

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knowledge-map

🌍 Interactive Mind Map for learning anything

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MachineLearning

Machine learning resources

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MarkdownPhotos

photos for Markdown

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MR-PRESSO

Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.

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my_udacity

The Udacity courses I took

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python-jumpstart-course-demos

Contains all the "handout" materials for my Python Jumpstart by Building 10 Apps course. This includes try it yourself and finished versions of the 10 apps.

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PyTorch-GAN

PyTorch implementations of Generative Adversarial Networks.

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revigoR

Scripts for accessing revigo gene ontology plots from R

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rvtests

Rare variant test software for next generation sequencing data

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scikit-allel

A Python package for exploring and analysing genetic variation data

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scikit-learn

scikit-learn: machine learning in Python

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TwoSampleMR

R package for performing 2-sample MR using MR-Base database

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